Miyakogusa Predicted Gene

Lj1g3v2416610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N341_SOYBN 279 70.2 78.5 (tr|I1N341) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G38480.1 153 42.1 56.3 | Symbols: | Uncharacterised protein family (UPF0497) | chr2:16110960-16111694 REVERSE LENGTH=188
Medicago Medtr7g071110.1 271 68.2 74.4 | CASP-like protein | HC | chr7:26328733-26330721 | 20130731
Soybean Glyma18g44020.1 279 70.2 78.5  
LJGI gnl|LJGI|AU251765 573 100.0 100.0 weakly similar to UniRef100_Q8LE26 Cluster: UPF0497 membrane protein At2g38480; n=1; Arabidopsis thaliana|Rep: UPF0497 membrane protein At2g38480 - Arabidopsis thaliana (Mouse-ear cress), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2416610.1 length: 199 aa.
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
method AccNumber shortName E-value location
HMMPfam PF04535 DUF588 3e-29 51-181
no_ID  
Seg seg seg NA 6-9
137-150
167-179
Putative transmembrane regions
  From To
TM segments
SOSUI		 54 74
88 110
134 155
171 192
Wolf-PSORT
Lj1g3v2416610.1	vacu 5, plas 4, nucl_plas 3.5, golg 2, extr 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2416610.1