Miyakogusa Predicted Gene

Lj1g3v2415470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B3VTL7_MEDSA 842 69.4 79.7 (tr|B3VTL7) TIR-NBS-LRR RCT1-like resistance protein OS=Medicago sativa PE=2 SV=1
TAIR_pep AT5G36930.1 449 43.5 61.0 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571907 REVERSE LENGTH=1188
Medicago Medtr4g014570.1 832 70.5 82.4 | disease resistance protein (TIR-NBS-LRR class) | HC | chr4:4130085-4120596 | 20130731
Soybean Glyma01g27460.1 815 69.3 78.6  
LJGI gnl|LJGI|TC61438 153 92.7 92.7 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago truncatula|Rep: TIR - Medicago truncatula (Barrel medic), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2415470.1 length: 570 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1.8e-07 5-56
superfamily SSF52200 Toll/Interleukin 1.1e-07 1-68
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 6.5e-23 126-141
202-216
295-309
518-534
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 2.9e-39 116-321
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.0042 123-262
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-29 85-322
no_ID  
Gene3D G3DSA:3.40.50.300 no description 9e-10 119-253
Gene3D G3DSA:3.80.10.10 no description 1.9e-10 419-568
HMMPanther PTHR11017 LEUCINE-RICH 2.1e-153 1-569
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 2.1e-153 1-569
Seg seg seg NA 208-221
superfamily SSF46785 "Winged 3.4e-17 315-423
superfamily SSF52058 L 2.9e-19 397-563
Wolf-PSORT
Lj1g3v2415470.1	chlo 6, nucl 2, cyto 2, cyto_nucl 2, mito 1, extr 1, E.R. 1, pero 1, cysk_nucl 1, nucl_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2415470.1