Miyakogusa Predicted Gene

Lj1g3v2391190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KU41_MEDTR 971 74.5 81.9 (tr|G7KU41) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g070420 PE=4 SV=1
TAIR_pep AT3G18020.1 659 55.0 69.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:6165449-6167515 FORWARD LENGTH=688
Medicago Medtr7g070420.1 971 74.5 81.9 | PPR containing plant-like protein | HC | chr7:25994193-25997035 | 20130731
Soybean Glyma18g43910.1 854 74.4 81.8  
LJGI gnl|LJGI|TC59264 1411 100.0 100.0 weakly similar to UniRef100_A7P6A4 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2391190.1 length: 640 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.015 110-137
324-351
HMMPfam PF13041 PPR_2 2.4e-10 140-186
253-299
391-438
462-511
535-580
HMMTigr TIGR00756 PPR: 1.5e-06 143-177
253-286
323-351
393-427
429-462
465-498
536-569
570-604
ProfileScan PS51375 PPR 11.422 34-68
106-140
141-175
176-206
216-250
251-285
321-351
286-320
391-425
356-390
427-462
463-497
533-567
498-528
568-602
no_ID  
HMMPanther PTHR24015 FAMILY 8e-136 9-610
HMMPanther PTHR24015:SF0 SUBFAMILY 8e-136 9-610
Seg seg seg NA 309-320
367-381
Wolf-PSORT
Lj1g3v2391190.1	chlo 6.5, chlo_mito 5.83333, mito 4, cyto_mito 2.83333, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2391190.1