Miyakogusa Predicted Gene

Lj1g3v2377970.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7L1Y8_SOYBN 444 75.2 80.7 (tr|K7L1Y8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G38330.1 330 54.9 68.6 | Symbols: | MATE efflux family protein | chr2:16064571-16067318 FORWARD LENGTH=521
Medicago Medtr7g070210.1 308 68.5 75.0 | MATE efflux family protein | HC | chr7:25888335-25894559 | 20130731
Soybean Glyma18g43740.1 348 59.9 66.9  
LJGI gnl|LJGI|TC64010 137 100.0 100.0 similar to UniRef100_A7QFF0 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2377970.3 length: 306 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 2.7e-16 120-262
HMMTigr TIGR00797 matE: 7.5e-69 2-282
no_ID  
HMMPanther PTHR11206 MULTIDRUG 2.6e-130 1-302
HMMPanther PTHR11206:SF47 MATE 2.6e-130 1-302
Seg seg seg NA 55-73
153-167
Putative transmembrane regions
  From To
TM segments
SOSUI
7 29
46 68
76 98
115 137
147 169
183 205
223 245
252 274
279 301
Wolf-PSORT
Lj1g3v2377970.3	plas 8, chlo 4, cysk_plas 4, E.R._plas 4, mito_plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2377970.3 Not targeted -49.260 -0.005 -0.317 73.08% -48.939