Miyakogusa Predicted Gene

Lj1g3v2372280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MTL7_SOYBN 1820 88.0 92.1 (tr|K7MTL7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G08960.1 1526 72.5 84.0 | Symbols: | ARM repeat superfamily protein | chr3:2730405-2736762 REVERSE LENGTH=1010
Medicago Medtr7g069460.1 1774 85.4 90.9 | importin-like protein | HC | chr7:25590446-25572272 | 20130731
Soybean Glyma07g18530.1 1495 74.4 80.0  
LJGI gnl|LJGI|FS362525 1475 99.9 99.9 similar to UniRef100_A7QHN3 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2372280.1 length: 1009 aa.
IPR001494 Importin-beta, N-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006886 intracellular protein transport    
Molecular Function GO:0008565 protein transporter activity    
HMMPfam PF03810 IBN_N 4.3e-14 29-102
HMMSmart SM00913 Importin-beta 2.4e-11 29-104
ProfileScan PS50166 IMPORTIN_B_NT 17.243 29-104
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2.3e-98 967-1006
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.4e-82 1-1008
no_ID  
HMMPanther PTHR10997 IMPORTIN-7, 6.4e-275 1-1006
HMMPanther PTHR10997:SF7 IMPORTIN 6.4e-275 1-1006
Seg seg seg NA 378-389
480-498
929-944
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 20
774 796
853 875
Wolf-PSORT
Lj1g3v2372280.1	plas 8, nucl 2, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2372280.1 Not targeted -41.507 -0.290 -8.464 56.83% -32.754