Miyakogusa Predicted Gene

Lj1g3v2370090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MTK3_SOYBN 732 85.4 91.2 (tr|K7MTK3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G51840.1 684 78.8 89.0 | Symbols: ACX4, ATSCX, ATG6 | acyl-CoA oxidase 4 | chr3:19225653-19229008 REVERSE LENGTH=436
Medicago Medtr7g068850.1 749 86.2 91.1 | acyl-CoA dehydrogenase | HC | chr7:25296388-25301382 | 20130731
Soybean Glyma03g07540.1 729 83.5 90.5  
LJGI gnl|LJGI|TC59526 1106 86.5 86.5 homologue to UniRef100_A7Y7F6 Cluster: Acyl-CoA oxidase; n=1; Glycine max|Rep: Acyl-CoA oxidase - Glycine max (Soybean), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2370090.1 length: 413 aa.
IPR006089 Acyl-CoA dehydrogenase, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00073 ACYL_COA_DH_2 NA 376-395
IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00441 Acyl-CoA_dh_1 2.5e-22 276-409
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:2.40.110.10 no description 4.9e-28 165-258
HMMPfam PF02770 Acyl-CoA_dh_M 4.4e-18 166-216
IPR006092 Acyl-CoA dehydrogenase, N-terminal
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02771 Acyl-CoA_dh_N 1.5e-22 51-160
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF47203 Acyl-CoA 2.9e-29 272-413
IPR009100 Acyl-CoA dehydrogenase/oxidase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56645 Acyl-CoA 3e-63 44-270
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.540.10 no description 2.6e-32 38-162
no_ID  
Gene3D G3DSA:1.20.140.10 no description 3.3e-33 259-411
HMMPanther PTHR10909 ELECTRON 1e-238 2-413
HMMPanther PTHR10909:SF122PREDICTED: HYPOTHETICAL 1e-238 2-413
Seg seg seg NA 114-125
Putative transmembrane regions
  From To
TM segments
SOSUI		 101 123
125 146
Wolf-PSORT
Lj1g3v2370090.1	chlo 3, vacu 3, cyto 2, extr 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2370090.1