Miyakogusa Predicted Gene

Lj1g3v2360050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MTK1_SOYBN 1307 74.8 82.9 (tr|K7MTK1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G05570.2 603 41.8 57.2 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:1656766-1663728 FORWARD LENGTH=1099
Medicago Medtr7g068810.1 1328 75.1 83.3 | nucleotide-binding protein | HC | chr7:25286828-25277493 | 20130731
Soybean Glyma11g09120.1 179 24.5 42.4  
LJGI gnl|LJGI|TC79568 1945 99.8 99.8 weakly similar to UniRef100_A7QHQ0 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2360050.1 length: 905 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 1.8 30-75
108-146
393-432
461-500
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 6.2e-22 365-587
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 4.9e-21 56-566
no_ID  
HMMPanther PTHR10241 LETHAL(2) 5e-138 1-593
HMMPanther PTHR10241:SF11 LETHAL 5e-138 1-593
Seg seg seg NA 591-604
648-657
787-793
810-822
Wolf-PSORT
Lj1g3v2360050.1	cyto 5, nucl 4, vacu 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2360050.1