Miyakogusa Predicted Gene

Lj1g3v2348940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LH38_SOYBN 558 65.5 72.0 (tr|K7LH38) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G02670.1 359 49.7 59.1 | Symbols: AtIDD12, IDD12 | indeterminate(ID)-domain 12 | chr4:1176190-1178489 REVERSE LENGTH=402
Medicago Medtr2g099990.1 360 58.7 69.6 | C2H2-type zinc finger protein | HC | chr2:42897047-42899888 | 20130731
Soybean Glyma03g31390.1 511 63.7 71.2  
LJGI gnl|LJGI|DC593437 155 84.1 84.1 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2348940.1 length: 441 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 79-99
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 77-99
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00012 76-99
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.8e+02 77-99
118-148
153-173
IPR022755 Zinc finger, double-stranded RNA binding
HMMPfam PF12171 zf-C2H2_jaz 5.4e-05 76-99
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 3.2e-130 48-245
HMMPanther PTHR10593:SF17 SUBFAMILY 3.2e-130 48-245
Seg seg seg NA 217-222
345-370
superfamily SSF57667 C2H2 0.0002 148-191
76-101
Wolf-PSORT
Lj1g3v2348940.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2348940.1