Miyakogusa Predicted Gene

Lj1g3v2326710.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC61536 331 86.8 86.8 similar to UniRef100_Q6IT13 Cluster: Type three secretion apparatus protein T; n=1; Edwardsiella ictaluri|Rep: Type three secretion apparatus protein T - Edwardsiella ictaluri, partial (8%)

Putative transmembrane regions

From To

TM segments
SOSUI 91 113

Wolf-PSORT

Lj1g3v2326710.1 nucl 9, chlo 2, mito 1, extr 1, golg_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2326710.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC61536	331	86.8	86.8	similar to UniRef100_Q6IT13 Cluster: Type three secretion apparatus protein T; n=1; Edwardsiella ictaluri\|Rep: Type three secretion apparatus protein T - Edwardsiella ictaluri, partial (8%)