Miyakogusa Predicted Gene

Lj1g3v2326700.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JLE2_SOYBN 474 70.7 75.4 (tr|I1JLE2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G01390.1 434 65.9 72.9 | Symbols: | DNAJ heat shock family protein | chr5:160500-162199 REVERSE LENGTH=335

Medicago Medtr4g015840.1 474 69.8 76.8 | DnaJ heat shock family protein | HC | chr4:4800688-4796670 | 20130731

Soybean Glyma03g07770.1 474 70.7 75.4

LJGI gnl|LJGI|TC75770 2006 99.6 99.6 homologue to UniRef100_A7QHR0 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2326700.1 length: 365 aa.

IPR001623 DnaJ domain

method AccNumber shortName E-value location

FPrintScan PR00625 JDOMAIN 1.1e-29 29-47
47-62
65-85
85-104

Gene3D G3DSA:1.10.287.110 no description 2.7e-35 22-115

HMMPfam PF00226 DnaJ 1.5e-29 27-90

HMMSmart SM00271 DnaJ 4.6e-33 26-85

ProfileScan PS50076 DNAJ_2 24.952 27-93

superfamily SSF46565 Chaperone 2.2e-32 23-101

IPR002939 Chaperone DnaJ, C-terminal

Biological Process GO:0006457 protein folding

Molecular Function GO:0051082 unfolded protein binding

HMMPfam PF01556 DnaJ_C 1.6e-22 277-356

IPR008971 HSP40/DnaJ peptide-binding

Biological Process GO:0006457 protein folding

Molecular Function GO:0051082 unfolded protein binding

superfamily SSF49493 HSP40/DnaJ 4.9e-19 270-359
187-269

IPR018253 DnaJ domain, conserved site

PatternScan PS00636 DNAJ_1 NA 70-89

no_ID

Gene3D G3DSA:2.60.260.20 no description 1.2e-24 188-266
268-348

HMMPanther PTHR24077 FAMILY 4.1e-122 23-362

Seg seg seg NA 5-22
58-71
102-120
131-163

Wolf-PSORT

Lj1g3v2326700.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2326700.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JLE2_SOYBN	474	70.7	75.4	(tr\|I1JLE2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G01390.1	434	65.9	72.9	\| Symbols: \| DNAJ heat shock family protein \| chr5:160500-162199 REVERSE LENGTH=335
Medicago	Medtr4g015840.1	474	69.8	76.8	\| DnaJ heat shock family protein \| HC \| chr4:4800688-4796670 \| 20130731
Soybean	Glyma03g07770.1	474	70.7	75.4
LJGI	gnl\|LJGI\|TC75770	2006	99.6	99.6	homologue to UniRef100_A7QHR0 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%)

IPR001623	DnaJ domain
Lj1g3v2326700.1				length: 365 aa.
method	AccNumber	shortName	E-value	location
FPrintScan	PR00625	JDOMAIN	1.1e-29	29-47 47-62 65-85 85-104
Gene3D	G3DSA:1.10.287.110	no description	2.7e-35	22-115
HMMPfam	PF00226	DnaJ	1.5e-29	27-90
HMMSmart	SM00271	DnaJ	4.6e-33	26-85
ProfileScan	PS50076	DNAJ_2	24.952	27-93
superfamily	SSF46565	Chaperone	2.2e-32	23-101
IPR002939	Chaperone DnaJ, C-terminal
Biological Process	GO:0006457	protein folding
Molecular Function	GO:0051082	unfolded protein binding
HMMPfam	PF01556	DnaJ_C	1.6e-22	277-356
IPR008971	HSP40/DnaJ peptide-binding
Biological Process	GO:0006457	protein folding
Molecular Function	GO:0051082	unfolded protein binding
superfamily	SSF49493	HSP40/DnaJ	4.9e-19	270-359 187-269
IPR018253	DnaJ domain, conserved site
PatternScan	PS00636	DNAJ_1	NA	70-89
no_ID
Gene3D	G3DSA:2.60.260.20	no description	1.2e-24	188-266 268-348
HMMPanther	PTHR24077	FAMILY	4.1e-122	23-362
Seg	seg	seg	NA	5-22 58-71 102-120 131-163