Miyakogusa Predicted Gene

Lj1g3v2315450.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KKE4_SOYBN 669 74.7 80.8 (tr|I1KKE4) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G51860.1 553 64.1 73.7 | Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 | cation exchanger 3 | chr3:19239458-19242519 FORWARD LENGTH=459

Medicago Medtr7g068380.1 645 72.3 77.8 | vacuolar cation/proton exchanger 3 | HC | chr7:25016522-25012334 | 20130731

Soybean Glyma07g18150.3 669 74.7 80.8

LJGI gnl|LJGI|TC61254 1088 99.6 99.6 similar to UniRef100_O64455 Cluster: Ca2+/H+ exchanger; n=1; Vigna radiata var. radiata|Rep: Ca2+/H+ exchanger - Phaseolus aureus (Mung bean) (Vigna radiata), partial (37%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2315450.1 length: 451 aa.

IPR004713 Calcium/proton exchanger

method AccNumber shortName E-value location

Biological Process GO:0006812 cation transport

Molecular Function GO:0008324 cation transmembrane transporter activity

Cellular Component GO:0016021 integral to membrane

Biological Process GO:0055085 transmembrane transport

HMMTigr TIGR00846 caca2: 8.9e-148 59-425

IPR004798 Calcium/proton exchanger CAX

Biological Process GO:0006816 calcium ion transport

Molecular Function GO:0015369 calcium:hydrogen antiporter activity

HMMTigr TIGR00378 cax: 3.2e-93 78-425

IPR004837 Sodium/calcium exchanger membrane region

Cellular Component GO:0016021 integral to membrane

Biological Process GO:0055085 transmembrane transport

HMMPfam PF01699 Na_Ca_ex 2.6e-20 103-249
292-420

no_ID

HMMPanther PTHR31503 FAMILY 5.6e-141 56-442

Seg seg seg NA 34-39
158-175
199-213
259-273

Putative transmembrane regions

From To

TM segments
SOSUI 86 108

137 159

163 184

197 219

232 254

278 300

315 337

350 372

383 405

407 429

Wolf-PSORT

Lj1g3v2315450.1 plas 7, vacu 5, E.R. 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2315450.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KKE4_SOYBN	669	74.7	80.8	(tr\|I1KKE4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G51860.1	553	64.1	73.7	\| Symbols: CAX3, ATHCX1, CAX1-LIKE, ATCAX3 \| cation exchanger 3 \| chr3:19239458-19242519 FORWARD LENGTH=459
Medicago	Medtr7g068380.1	645	72.3	77.8	\| vacuolar cation/proton exchanger 3 \| HC \| chr7:25016522-25012334 \| 20130731
Soybean	Glyma07g18150.3	669	74.7	80.8
LJGI	gnl\|LJGI\|TC61254	1088	99.6	99.6	similar to UniRef100_O64455 Cluster: Ca2+/H+ exchanger; n=1; Vigna radiata var. radiata\|Rep: Ca2+/H+ exchanger - Phaseolus aureus (Mung bean) (Vigna radiata), partial (37%)

IPR004713	Calcium/proton exchanger
Lj1g3v2315450.1				length: 451 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0006812	cation transport
Molecular Function	GO:0008324	cation transmembrane transporter activity
Cellular Component	GO:0016021	integral to membrane
Biological Process	GO:0055085	transmembrane transport
HMMTigr	TIGR00846	caca2:	8.9e-148	59-425
IPR004798	Calcium/proton exchanger CAX
Biological Process	GO:0006816	calcium ion transport
Molecular Function	GO:0015369	calcium:hydrogen antiporter activity
HMMTigr	TIGR00378	cax:	3.2e-93	78-425
IPR004837	Sodium/calcium exchanger membrane region
Cellular Component	GO:0016021	integral to membrane
Biological Process	GO:0055085	transmembrane transport
HMMPfam	PF01699	Na_Ca_ex	2.6e-20	103-249 292-420
no_ID
HMMPanther	PTHR31503	FAMILY	5.6e-141	56-442
Seg	seg	seg	NA	34-39 158-175 199-213 259-273

	From	To
TM segments SOSUI	86	108
	137	159
	163	184
	197	219
	232	254
	278	300
	315	337
	350	372
	383	405
	407	429