Miyakogusa Predicted Gene

Lj1g3v2313120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T9K0_LOTJA 121 55.6 55.6 (tr|I3T9K0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G51880.3 74.7 39.8 44.9 | Symbols: HMGB1, NFD1 | high mobility group B1 | chr3:19247241-19248491 REVERSE LENGTH=178
Medicago Medtr7g068280.1 94.4 46.7 49.2 | high mobility group (HMG)-box protein | HC | chr7:24961149-24964926 | 20130731
Soybean Glyma03g08270.4 88.2 43.7 48.4  
LJGI gnl|LJGI|TC59634 880 100.0 100.0 similar to UniRef100_Q1EMR5 Cluster: HMG-protein; n=1; Plantago major|Rep: HMG-protein - Plantago major (Common plantain), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2313120.1 length: 148 aa.
IPR009071 High mobility group (HMG) box domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.30.10 no description 5.4e-24 48-122
HMMPfam PF00505 HMG_box 4e-26 50-119
HMMSmart SM00398 high 1e-26 49-120
ProfileScan PS50118 HMG_BOX_2 19.173 50-119
superfamily SSF47095 HMG-box 7.4e-25 30-123
no_ID  
Coil coil coiled-coil NA 101-122
126-147
FPrintScan PR00886 HIGHMOBLTY12 3.1e-06 15-35
84-103
103-123
HMMPanther PTHR13711 SWI/SNF-RELATED 1.1e-32 29-146
Seg seg seg NA 31-54
75-86
94-113
127-146
Wolf-PSORT
Lj1g3v2313120.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2313120.1