Miyakogusa Predicted Gene

Lj1g3v2299660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KKA8_SOYBN 912 74.6 83.9 (tr|I1KKA8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G09060.1 704 55.9 73.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:2766367-2768430 REVERSE LENGTH=687
Medicago Medtr7g066990.2 934 74.4 86.0 | pentatricopeptide (PPR) repeat protein | HC | chr7:24488667-24490754 | 20130731
Soybean Glyma07g17620.1 876 74.0 83.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2299660.1 length: 611 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00058 164-192
268-293
HMMPfam PF12854 PPR_1 2e-06 121-151
367-400
475-503
HMMPfam PF13041 PPR_2 7.2e-11 55-103
197-245
302-350
406-455
513-561
HMMPfam PF13812 PPR_3 0.017 22-55
HMMTigr TIGR00756 PPR: 0.0024 59-91
93-127
129-162
164-193
199-233
234-263
268-293
305-333
340-373
375-407
409-443
444-480
482-511
515-549
550-583
ProfileScan PS51375 PPR 10.600 21-55
56-90
91-125
162-196
126-161
197-231
232-266
267-296
302-336
337-371
372-406
407-441
442-478
513-547
479-509
548-582
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-09 55-287
no_ID  
HMMPanther PTHR24015 FAMILY 2.6e-165 1-560
HMMPanther PTHR24015:SF0 SUBFAMILY 2.6e-165 1-560
superfamily SSF81901 HCP-like 6.2e-05 91-342
383-579
Wolf-PSORT
Lj1g3v2299660.1	cyto 10, chlo 2, nucl 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2299660.1