Miyakogusa Predicted Gene

Lj1g3v2281680.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K7D8_SOYBN 1082 75.0 82.3 (tr|I1K7D8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G42310.1 929 69.6 81.4 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:16915860-16918238 FORWARD LENGTH=709
Medicago Medtr3g115270.1 1144 80.8 86.6 | PPR containing plant-like protein | HC | chr3:53902855-53905578 | 20130731
Soybean Glyma04g01980.2 1081 76.3 84.6  
LJGI gnl|LJGI|TC82519 1735 100.0 100.0 similar to UniRef100_A7QPB3 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2281680.2 length: 688 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 8.8e-06 566-595
HMMPfam PF12854 PPR_1 4.1e-07 523-552
HMMPfam PF13041 PPR_2 7.5e-10 179-222
319-365
392-434
457-502
603-644
HMMPfam PF13812 PPR_3 0.00099 286-317
HMMTigr TIGR00756 PPR: 1.7e-08 179-211
289-317
321-354
355-388
390-423
427-459
460-492
496-529
530-563
566-598
603-634
635-668
ProfileScan PS51375 PPR 11.674 176-210
211-247
248-282
283-317
318-352
353-387
388-422
423-457
458-492
493-527
528-562
563-597
598-632
633-667
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00026 350-471
525-592
no_ID  
HMMPanther PTHR24015 FAMILY 8.9e-151 58-670
HMMPanther PTHR24015:SF0 SUBFAMILY 8.9e-151 58-670
Seg seg seg NA 74-93
111-132
superfamily SSF81901 HCP-like 0.00052 176-430
467-602
Wolf-PSORT
Lj1g3v2281680.2	chlo 11, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2281680.2