Miyakogusa Predicted Gene

Lj1g3v2280630.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1K7E2_SOYBN 758 84.8 87.2 (tr|I1K7E2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G42430.1 617 73.4 80.3 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | chr1:15891512-15894322 FORWARD LENGTH=426

Medicago Medtr3g115210.1 717 82.2 84.4 | hypothetical protein | HC | chr3:53854604-53861373 | 20130731

Soybean Glyma06g02120.1 758 84.8 87.2

LJGI gnl|LJGI|TC75896 1346 99.4 99.4 similar to UniRef100_A7NVT7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2280630.1 length: 452 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 44-49
104-117

Wolf-PSORT

Lj1g3v2280630.1 nucl 10, mito 2, chlo 1, cyto 1, cyto_mito 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2280630.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1K7E2_SOYBN	758	84.8	87.2	(tr\|I1K7E2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G42430.1	617	73.4	80.3	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). \| chr1:15891512-15894322 FORWARD LENGTH=426
Medicago	Medtr3g115210.1	717	82.2	84.4	\| hypothetical protein \| HC \| chr3:53854604-53861373 \| 20130731
Soybean	Glyma06g02120.1	758	84.8	87.2
LJGI	gnl\|LJGI\|TC75896	1346	99.4	99.4	similar to UniRef100_A7NVT7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)

no_ID
Lj1g3v2280630.1				length: 452 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	44-49 104-117