| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JSW6_SOYBN | 681 | 93.7 | 96.3 | (tr|I1JSW6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G20540.1 | 570 | 76.6 | 88.9 | | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:7112652-7115191 FORWARD LENGTH=351 |
| Medicago | Medtr3g115200.1 | 633 | 87.1 | 92.9 | | transducin/WD-like repeat-protein | HC | chr3:53847316-53851987 | 20130731 |
| Soybean | Glyma04g02030.1 | 681 | 93.7 | 96.3 | |
| LJGI | gnl|LJGI|TC59636 | 2077 | 99.8 | 99.8 | similar to UniRef100_A7NVT6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
| Lj1g3v2280620.1 | length: 350 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 1e-05 | 243-280 |
| HMMSmart | SM00320 | WD40 | 6.3 | 55-97 109-149 199-237 241-281 302-342 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 9.005 | 248-280 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 2.5e-27 | 25-340 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 11.708 | 164-290 |
| superfamily | SSF50978 | WD40 | 1.9e-28 | 19-346 |
| no_ID | ||||
| HMMPanther | PTHR14205 | WD-REPEAT | 2.8e-226 | 3-350 |
| HMMPanther | PTHR14205:SF1 | WD-REPEAT | 2.8e-226 | 3-350 |
Lj1g3v2280620.1 mito 4, pero 4, chlo 3, nucl 1, cyto 1, cysk 1, cyto_nucl 1, cysk_nucl 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v2280620.1 |