Miyakogusa Predicted Gene

Lj1g3v2268450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XNL7_PRUPE 1109 79.2 83.7 (tr|M5XNL7) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002083mg PE=4 SV=1
TAIR_pep AT5G42270.1 1075 77.8 82.2 | Symbols: VAR1, FTSH5 | FtsH extracellular protease family | chr5:16902659-16905102 FORWARD LENGTH=704
Medicago Medtr3g115110.1 1126 82.2 85.3 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr3:53794996-53799860 | 20130731
Soybean Glyma06g02200.1 1090 80.3 83.2  
LJGI gnl|LJGI|TC67690 2161 100.0 100.0 homologue to UniRef100_A7NVT2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2268450.1 length: 710 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 1e-82 490-703
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.8e-23 292-431
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 7.9e-44 297-428
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 399-417
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 36.249 17-708
HMMTigr TIGR01241 FtsH_fam: 2e-221 203-703
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.1e-72 249-501
no_ID  
Gene3D G3DSA:1.10.8.60 no description 2.3e-25 430-503
Gene3D G3DSA:3.40.50.300 no description 5.7e-59 256-427
HMMPanther PTHR23076 METALLOPROTEASE 0 129-704
HMMPanther PTHR23076:SF10 CELL 0 129-704
Seg seg seg NA 55-73
209-223
228-239
365-375
624-634
superfamily SSF140990 FtsH 2.6e-66 510-704
Wolf-PSORT
Lj1g3v2268450.1	chlo 7, cyto 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2268450.1