Miyakogusa Predicted Gene
- Lj1g3v2239520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K7H6_SOYBN |
328 |
80.1 |
85.9 |
(tr|I1K7H6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G75980.1 |
290 |
70.5 |
85.3 |
| Symbols: | Single hybrid motif superfamily protein | chr1:28522936-28524302 REVERSE LENGTH=225 |
| Medicago |
Medtr3g114470.1 |
320 |
76.8 |
84.2 |
| single hybrid motif protein | HC | chr3:53452644-53448378 | 20130731 |
| Soybean |
Glyma06g02440.2 |
328 |
80.1 |
85.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2239520.1 |
length: 208 aa. |
| IPR002930 |
Glycine cleavage H-protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005960 |
glycine cleavage complex |
|
|
| Biological Process |
GO:0006546 |
glycine catabolic process |
|
|
| HMMPfam |
PF01597 |
GCV_H |
4.4e-06 |
99-204 |
| IPR011053 |
Single hybrid motif |
| superfamily |
SSF51230 |
Single |
5e-19 |
62-206 |
| no_ID |
|
| Gene3D |
G3DSA:2.40.50.100 |
no description |
8.9e-08 |
92-204 |
| HMMPanther |
PTHR13651 |
UNCHARACTERIZED |
5.7e-65 |
28-205 |
| HMMPanther |
PTHR13651:SF0 |
SUBFAMILY |
5.7e-65 |
28-205 |
- Wolf-PSORT
Lj1g3v2239520.1 cyto 5, nucl 4, cysk 3, chlo 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2239520.1 |
|