Miyakogusa Predicted Gene

Lj1g3v2217460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHP9_SOYBN 488 57.0 65.2 (tr|K7KHP9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G35890.1 144 31.3 44.5 | Symbols: | winged-helix DNA-binding transcription factor family protein | chr4:16997433-17000410 FORWARD LENGTH=523
Medicago Medtr1g025920.1 344 46.5 59.0 | LA-related protein 6 LA RNA-binding domain protein | HC | chr1:8346097-8339214 | 20130731
Soybean Glyma04g02410.1 488 57.0 65.2  
LJGI gnl|LJGI|TC57839 1090 100.0 100.0 similar to UniRef100_A7NSQ5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2217460.1 length: 507 aa.
IPR006630 RNA-binding protein Lupus La
method AccNumber shortName E-value location
HMMPfam PF05383 La 3.6e-23 362-419
HMMSmart SM00715 Domain 7.3e-28 356-434
ProfileScan PS50961 HTH_LA 26.648 352-441
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.3e-27 354-432
no_ID  
HMMPanther PTHR22792 LUPUS 4e-38 57-494
HMMPanther PTHR22792:SF22 PUTATIVE 4e-38 57-494
Seg seg seg NA 45-80
112-125
183-205
superfamily SSF46785 "Winged 4.1e-30 346-445
Wolf-PSORT
Lj1g3v2217460.1	nucl 10, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2217460.1