Miyakogusa Predicted Gene

Lj1g3v2173100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SZ51_LOTJA 559 100.0 100.0 (tr|I3SZ51) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G75760.1 476 82.0 91.9 | Symbols: | ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE LENGTH=272
Medicago Medtr3g113920.1 495 86.0 93.8 | ER lumen protein retaining receptor-like protein | HC | chr3:53127367-53124389 | 20130731
Soybean Glyma06g02680.1 505 88.2 94.9  
LJGI gnl|LJGI|TC71359 1608 99.8 99.8 similar to UniRef100_A5BWC3 Cluster: ER lumen protein retaining receptor; n=1; Vitis vinifera|Rep: ER lumen protein retaining receptor - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2173100.1 length: 272 aa.
IPR000133 ER lumen protein retaining receptor
method AccNumber shortName E-value location
Biological Process GO:0006621 protein retention in ER lumen    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0046923 ER retention sequence binding    
FPrintScan PR00660 ERLUMENR 2.4e-15 48-67
75-95
166-186
188-202
202-220
HMMPanther PTHR10585 ER 1.6e-136 16-272
HMMPfam PF00810 ER_lumen_recept 2.6e-41 72-215
no_ID  
HMMPanther PTHR10585:SF10 ER 1.6e-136 16-272
Putative transmembrane regions
  From To
TM segments
SOSUI		 23 45
48 69
83 98
104 122
136 158
163 185
195 217
227 249
Wolf-PSORT
Lj1g3v2173100.1	chlo 7, plas 3, E.R. 3, E.R._plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2173100.1