Miyakogusa Predicted Gene
- Lj1g3v2172910.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JT39_SOYBN |
207 |
68.2 |
77.0 |
(tr|I1JT39) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G47870.2 |
112 |
46.7 |
65.6 |
| Symbols: ATE2F2 | winged-helix DNA-binding transcription factor family protein | chr1:17634937-17637557 FORWARD LENGTH=395 |
| Medicago |
Medtr3g113800.1 |
190 |
62.0 |
72.7 |
| E2F transcription factor | HC | chr3:53087588-53083226 | 20130731 |
| Soybean |
Glyma04g02720.2 |
207 |
68.2 |
77.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2172910.1 |
length: 153 aa. |
| IPR015633 |
E2F Family |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12081 |
TRANSCRIPTION |
4.2e-36 |
14-131 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
37-58 |
| HMMPanther |
PTHR12081:SF18 |
TRANSCRIPTION |
4.2e-36 |
14-131 |
| Seg |
seg |
seg |
NA |
42-56 |
| superfamily |
SSF144074 |
E2F-DP |
3.2e-25 |
18-125 |
- Wolf-PSORT
Lj1g3v2172910.1 cyto 7, nucl 2, mito 2, chlo 1, plas 1, extr 1, cyto_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2172910.1 |
|