Miyakogusa Predicted Gene

Lj1g3v2155550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MC56_SOYBN 876 69.1 77.2 (tr|I1MC56) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G19850.1 663 71.2 81.0 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr1:6887353-6891182 FORWARD LENGTH=902
Medicago Medtr1g024025.1 833 61.8 70.4 | auxin response factor 2 | LC | chr1:7778460-7771119 | 20130731
Soybean Glyma14g40540.1 876 69.1 77.2  
LJGI gnl|LJGI|AV781081 484 99.6 99.6 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2155550.1 length: 664 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 7.3e-23 149-250
HMMSmart SM01019 B3 2.3e-24 149-251
ProfileScan PS50863 B3 13.422 149-251
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 3.9e-33 275-358
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 2.5e-41 143-263
superfamily SSF101936 DNA-binding 2.7e-51 132-279
no_ID  
HMMPanther PTHR31384 FAMILY 3.3e-199 18-450
Seg seg seg NA 273-280
Wolf-PSORT
Lj1g3v2155550.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2155550.1