Miyakogusa Predicted Gene

Lj1g3v2155540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MHI8_SOYBN 1266 73.5 77.9 (tr|K7MHI8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G17070.1 775 58.5 70.0 | Symbols: | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain | chr1:5837653-5840202 FORWARD LENGTH=849
Medicago Medtr8g010350.2 1126 67.0 74.3 | tuftelin-interacting protein | HC | chr8:2660340-2663583 | 20130731
Soybean Glyma16g27070.1 1126 76.2 80.1  
LJGI gnl|LJGI|AV777131 737 100.0 100.0 similar to UniRef100_A7PAZ3 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2155540.1 length: 872 aa.
IPR000467 G-patch domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01585 G-patch 1e-13 207-249
HMMSmart SM00443 glycine 2e-15 205-250
ProfileScan PS50174 G_PATCH 15.468 207-252
IPR022159 Tuftelin interacting protein N-terminal
HMMPfam PF12457 TIP_N 2.9e-19 3-104
IPR022783 GC-rich sequence DNA-binding factor domain
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF07842 GCFC 4.5e-83 427-694
no_ID  
Coil coil coiled-coil NA 292-313
361-410
HMMPanther PTHR23329 TUFTELIN-INTERACTING 1.5e-244 2-868
HMMPanther PTHR23329:SF1 TUFTELIN 1.5e-244 2-868
Seg seg seg NA 49-68
95-108
111-130
138-154
170-185
280-298
382-397
770-783
Wolf-PSORT
Lj1g3v2155540.1	cyto 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2155540.1