Miyakogusa Predicted Gene

Lj1g3v2143380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K7L7_SOYBN 641 82.6 89.4 (tr|I1K7L7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G29860.1 510 62.0 77.8 | Symbols: EMB2757, TAN | Transducin/WD40 repeat-like superfamily protein | chr4:14603296-14605704 REVERSE LENGTH=386
Medicago Medtr3g113190.19 603 78.8 83.9 | guanine nucleotide-binding protein beta subunit-like protein | HC | chr3:52893191-52902486 | 20130731
Soybean Glyma06g02910.1 641 82.6 89.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2143380.1 length: 387 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 1.2e-06 8-45
70-91
314-339
344-381
HMMSmart SM00320 WD40 7.7e-05 6-45
50-91
254-293
300-339
342-381
ProfileScan PS50082 WD_REPEATS_2 11.879 13-54
78-100
349-387
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.3e-26 168-193
194-383
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 21.041 13-387
superfamily SSF50978 WD40 1.2e-44 5-385
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 32-46
368-382
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 8.8e-07 32-46
78-92
368-382
no_ID  
HMMPanther PTHR22847 WD40 1.2e-138 3-384
HMMPanther PTHR22847:SF58 AFR153WP 1.2e-138 3-384
Wolf-PSORT
Lj1g3v2143380.1	chlo 7, mito 5, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2143380.1