Miyakogusa Predicted Gene

Lj1g3v2140880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M297_SOYBN 640 66.4 78.2 (tr|K7M297) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G15200.1 488 54.4 69.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:5117489-5119060 REVERSE LENGTH=523
Medicago Medtr2g060630.1 619 65.6 75.7 | PPR containing plant-like protein | HC | chr2:25711944-25710341 | 20130731
Soybean Glyma13g34870.1 524 70.8 83.0  
LJGI gnl|LJGI|BP035488 1059 100.0 100.0 similar to UniRef100_A7P1S1 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2140880.1 length: 495 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 1.3e-07 219-267
290-339
398-441
HMMTigr TIGR00756 PPR: 7.8e-07 116-146
222-254
256-287
293-327
329-357
398-430
433-463
ProfileScan PS51375 PPR 11.257 113-143
148-182
183-218
219-253
254-288
291-325
326-356
395-429
430-464
no_ID  
HMMPanther PTHR24015 FAMILY 6.4e-101 2-463
HMMPanther PTHR24015:SF0 SUBFAMILY 6.4e-101 2-463
Seg seg seg NA 77-87
263-277
480-492
Wolf-PSORT
Lj1g3v2140880.1	chlo 8, mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2140880.1