Miyakogusa Predicted Gene

Lj1g3v2139680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JT73_SOYBN 587 74.2 82.1 (tr|I1JT73) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G09850.1 534 65.6 76.7 | Symbols: XBCP3 | xylem bark cysteine peptidase 3 | chr1:3201848-3203875 FORWARD LENGTH=437
Medicago Medtr3g112430.1 597 75.1 82.6 | papain family cysteine protease | HC | chr3:52684152-52681029 | 20130731
Soybean Glyma04g03090.1 587 74.2 82.1  
LJGI gnl|LJGI|TC78549 54.0 85.7 85.7 similar to UniRef100_O24321 Cluster: Cysteine proteinase precursor; n=1; Phaseolus vulgaris|Rep: Cysteine proteinase precursor - Phaseolus vulgaris (Kidney bean) (French bean), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2139680.1 length: 423 aa.
IPR000118 Granulin
method AccNumber shortName E-value location
HMMPfam PF00396 Granulin 2.9e-10 368-417
HMMSmart SM00277 Granulin 1.9e-22 357-415
IPR000169 Cysteine peptidase, cysteine active site
PatternScan PS00139 THIOL_PROTEASE_CYS NA 143-154
IPR000668 Peptidase C1A, papain C-terminal
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008234 cysteine-type peptidase activity    
FPrintScan PR00705 PAPAIN 1.9e-10 143-158
285-295
300-306
HMMPfam PF00112 Peptidase_C1 1.4e-82 125-339
HMMSmart SM00645 Papain 9.2e-121 125-340
IPR013128 Peptidase C1A, papain
Molecular Function GO:0008234 cysteine-type peptidase activity    
HMMPanther PTHR12411 CYSTEINE 7.1e-209 11-423
IPR013201 Proteinase inhibitor I29, cathepsin propeptide
HMMPfam PF08246 Inhibitor_I29 1e-18 36-93
HMMSmart SM00848 Cathepsin 1.8e-25 36-93
IPR025660 Cysteine peptidase, histidine active site
PatternScan PS00639 THIOL_PROTEASE_HIS NA 283-293
IPR025661 Cysteine peptidase, asparagine active site
PatternScan PS00640 THIOL_PROTEASE_ASN NA 300-319
no_ID  
Gene3D G3DSA:3.90.70.10 no description 2.9e-117 17-340
HMMPanther PTHR12411:SF44 CYSTEINE 7.1e-209 11-423
Seg seg seg NA 7-36
339-356
superfamily SSF54001 Cysteine 5.9e-105 32-340
superfamily SSF57277 Granulin 3.4e-06 354-389
Putative transmembrane regions
  From To
TM segments
SOSUI
7 29
Wolf-PSORT
Lj1g3v2139680.1	chlo 6, nucl 3, extr 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2139680.1