Miyakogusa Predicted Gene

Lj1g3v2139530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LHX5_SOYBN 1581 88.1 92.9 (tr|I1LHX5) Beta-galactosidase OS=Glycine max PE=3 SV=1
TAIR_pep AT4G36360.1 1439 79.1 88.5 | Symbols: BGAL3 | beta-galactosidase 3 | chr4:17176840-17181143 REVERSE LENGTH=856
Medicago Medtr5g021190.1 1546 86.8 92.9 | beta-galactosidase | HC | chr5:8143070-8137186 | 20130731
Soybean Glyma11g07760.1 1581 88.1 92.9  
LJGI gnl|LJGI|TC67368 2127 99.2 99.2 similar to UniRef100_Q5I190 Cluster: Beta-galactosidase; n=1; Prunus persica|Rep: Beta-galactosidase - Prunus persica (Peach), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2139530.1 length: 849 aa.
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
method AccNumber shortName E-value location
Molecular Function GO:0030246 carbohydrate binding    
HMMPfam PF02140 Gal_Lectin 3.1e-20 766-843
ProfileScan PS50228 SUEL_LECTIN 17.976 762-844
IPR001944 Glycoside hydrolase, family 35
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00742 GLHYDRLASE35 7.9e-85 39-56
60-78
115-134
172-187
251-266
288-303
308-324
622-636
649-665
HMMPanther PTHR23421 BETA-GALACTOSIDASE 0 1-753
HMMPfam PF01301 Glyco_hydro_35 1e-117 36-340
IPR008979 Galactose-binding domain-like
Gene3D G3DSA:2.60.120.260 no description 8.9e-10 622-730
superfamily SSF49785 Galactose-binding 7.1e-30 403-577
580-756
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 2.2e-121 27-345
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 4e-102 24-345
IPR019801 Glycoside hydrolase, family 35, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01182 GLYCOSYL_HYDROL_F35 NA 174-186
no_ID  
HMMPanther PTHR23421:SF2 BETA-GALACTOSIDASE 0 1-753
Putative transmembrane regions
  From To
TM segments
SOSUI
8 30
Wolf-PSORT
Lj1g3v2139530.1	chlo 4, vacu 3, nucl 2, plas 2, extr 2, chlo_mito 2, nucl_plas 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2139530.1