Miyakogusa Predicted Gene
- Lj1g3v2139400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SVL6_LOTJA |
211 |
100.0 |
100.0 |
(tr|I3SVL6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G75500.2 |
131 |
56.2 |
81.9 |
| Symbols: WAT1 | Walls Are Thin 1 | chr1:28338282-28340091 REVERSE LENGTH=389 |
| Medicago |
Medtr5g021160.1 |
179 |
84.9 |
90.6 |
| nodulin MtN21/EamA-like transporter family protein | HC | chr5:8123798-8126744 | 20130731 |
| Soybean |
Glyma11g07730.1 |
175 |
80.2 |
91.5 |
|
| LJGI |
gnl|LJGI|TC77901 |
262 |
99.3 |
99.3 |
weakly similar to UniRef100_A7QE45 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2139400.1 |
length: 106 aa. |
| IPR000620 |
Drug/metabolite transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF00892 |
EamA |
1.3e-12 |
10-102 |
| no_ID |
|
| HMMPanther |
PTHR31218 |
FAMILY |
1.2e-28 |
1-105 |
| superfamily |
SSF103481 |
Multidrug |
8.7e-06 |
18-100 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
13 |
35 |
| 48 |
70 |
| 79 |
101 |
- Wolf-PSORT
Lj1g3v2139400.1 vacu 7, extr 2, golg 2, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2139400.1 |
|