Miyakogusa Predicted Gene

Lj1g3v2128340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JT85_SOYBN 528 94.5 97.4 (tr|I1JT85) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G24550.2 467 82.1 88.5 | Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451
Medicago Medtr3g112190.1 514 91.9 97.4 | AP-4 complex subunit mu-1 | HC | chr3:52543098-52538217 | 20130731
Soybean Glyma04g03220.1 528 94.5 97.4  
LJGI gnl|LJGI|TC61512 1370 100.0 100.0 homologue to UniRef100_A7NT73 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2128340.1 length: 274 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 4.2e-23 13-33
102-129
249-274
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 3e-25 182-272
ProfileScan PS51072 MHD 31.483 181-274
superfamily SSF49447 Second 4.4e-24 173-272
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 1.2e-37 2-144
IPR022775 AP complex, mu/sigma subunit
HMMPfam PF01217 Clat_adaptor_s 1e-05 2-131
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 2.1e-25 182-272
Gene3D G3DSA:3.30.450.60 no description 2.8e-43 2-142
HMMPanther PTHR11998 CLATHRIN 4.2e-134 1-273
HMMPanther PTHR11998:SF13 CLATHRIN 4.2e-134 1-273
Wolf-PSORT
Lj1g3v2128340.1	cyto 6, nucl 4.5, cysk_nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2128340.1