Miyakogusa Predicted Gene

Lj1g3v2124920.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQB7_SOYBN 1625 79.2 85.2 (tr|I1KQB7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G14850.1 1205 62.0 74.3 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5123259 REVERSE LENGTH=1464
Medicago Medtr8g105290.1 1615 78.1 84.4 | nuclear pore complex Nup155-like protein | HC | chr8:44427185-44416638 | 20130731
Soybean Glyma08g05070.1 1625 79.2 85.2  
LJGI gnl|LJGI|DC598168 850 94.4 94.4 similar to UniRef100_A7P3V0 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2124920.2 length: 1026 aa.
IPR004870 Nucleoporin, Nup155-like
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
Biological Process GO:0006913 nucleocytoplasmic transport    
Molecular Function GO:0017056 structural constituent of nuclear pore    
HMMPanther PTHR10350 NUCLEAR 0 11-1014
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
HMMPfam PF03177 Nucleoporin_C 4.6e-106 289-929
no_ID  
Coil coil coiled-coil NA 830-851
HMMPanther PTHR10350:SF6 NUCLEOPORIN 0 11-1014
Seg seg seg NA 312-319
332-346
651-662
720-732
Wolf-PSORT
Lj1g3v2124920.2	nucl 6, chlo 3, nucl_plas 3, cyto 2, cysk 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2124920.2