Miyakogusa Predicted Gene

Lj1g3v2098340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KDK0_SOYBN 1231 84.1 91.0 (tr|K7KDK0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G13650.1 508 36.4 57.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Medicago Medtr8g065730.2 534 38.2 58.1 | PPR containing plant-like protein | HC | chr8:27332922-27335168 | 20130731
Soybean Glyma03g15860.1 1208 84.7 91.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2098340.1 length: 692 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0035 55-81
83-112
158-180
184-213
359-382
459-483
HMMPfam PF13041 PPR_2 4.5e-11 284-331
384-432
HMMTigr TIGR00756 PPR: 0.0023 55-83
83-112
184-217
286-320
388-421
460-483
ProfileScan PS51375 PPR 5.612 81-115
50-80
15-49
182-216
151-181
116-150
284-318
319-353
385-419
354-384
420-455
456-486
522-556
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.2e-08 495-551
no_ID  
HMMPanther PTHR24015 FAMILY 3.2e-275 52-692
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 3.2e-275 52-692
HMMPfam PF14432 DYW_deaminase 3.4e-15 576-682
superfamily SSF48452 TPR-like 4.8e-05 354-535
Wolf-PSORT
Lj1g3v2098340.1	chlo 7.5, chlo_mito 5.5, mito 2.5, nucl 2, cyto 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2098340.1