Miyakogusa Predicted Gene

Lj1g3v2095550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JV00_SOYBN 878 66.8 73.0 (tr|I1JV00) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G51580.1 236 33.0 48.9 | Symbols: | RNA-binding KH domain-containing protein | chr1:19125612-19128102 FORWARD LENGTH=621
Medicago Medtr3g110650.2 763 71.4 80.8 | RNA-binding KH domain protein | HC | chr3:51710144-51714718 | 20130731
Soybean Glyma04g09300.1 805 77.1 84.1  
LJGI gnl|LJGI|FS345776 839 99.3 99.3 similar to UniRef100_A7NUF5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2095550.1 length: 683 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 1.2e-05 33-108
187-262
328-404
413-488
607-677
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 4.5e-08 37-91
191-255
331-382
417-482
610-672
ProfileScan PS50084 KH_TYPE_1 13.586 34-103
188-257
329-396
414-483
608-672
no_ID  
Coil coil coiled-coil NA 89-117
Gene3D G3DSA:3.30.1370.10 no description 1.9e-12 35-89
178-258
327-403
417-488
608-676
HMMPanther PTHR10288 KH 4.1e-106 35-516
HMMPanther PTHR10288:SF53 KH 4.1e-106 35-516
Seg seg seg NA 11-27
46-57
88-142
279-293
611-622
superfamily SSF54791 Eukaryotic 4.1e-13 402-495
175-268
21-87
595-678
317-384
Wolf-PSORT
Lj1g3v2095550.1	mito 6, chlo 4, nucl 2, cysk 1, cyto_nucl 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2095550.1