Miyakogusa Predicted Gene

Lj1g3v2095480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K9H4_SOYBN 1124 76.0 84.0 (tr|I1K9H4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25850.4 835 72.4 81.4 | Symbols: PAPS2 | poly(A) polymerase 2 | chr2:11026048-11030440 REVERSE LENGTH=797
Medicago Medtr3g110375.7 1110 76.5 83.3 | poly(A) polymerase-like protein | HC | chr3:51561683-51555466 | 20130731
Soybean Glyma06g09310.2 1124 76.0 84.0  
LJGI gnl|LJGI|FS330741 858 99.1 99.1 similar to UniRef100_A7P724 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2095480.1 length: 701 aa.
IPR002934 Nucleotidyl transferase domain
method AccNumber shortName E-value location
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF01909 NTP_transf_2 2.3e-05 83-136
IPR007010 Poly(A) polymerase, RNA-binding domain
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
Gene3D G3DSA:3.30.70.590 no description 1.7e-32 357-483
HMMPfam PF04926 PAP_RNA-bind 1.6e-35 357-491
IPR007012 Poly(A) polymerase, central domain
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Biological Process GO:0043631 RNA polyadenylation    
HMMPfam PF04928 PAP_central 1.7e-104 11-355
IPR011068 Nucleotidyltransferase, class I, C-terminal-like
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0016779 nucleotidyltransferase activity    
Biological Process GO:0031123 RNA 3'-end processing    
superfamily SSF55003 PAP/Archaeal 4.4e-41 355-483
IPR014492 Poly(A) polymerase
Molecular Function GO:0004652 polynucleotide adenylyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0043631 RNA polyadenylation    
HMMPIR PIRSF018425 Poly(A) 1.7e-282 1-610
no_ID  
Gene3D G3DSA:1.10.1410.10 no description 2e-88 150-355
HMMPanther PTHR10682 POLY(A) 0 10-570
HMMPanther PTHR10682:SF5 POLY(A) 0 10-570
Seg seg seg NA 12-20
45-58
370-379
superfamily SSF81301 Nucleotidyltransferase 7.6e-61 5-204
superfamily SSF81631 PAP/OAS1 6.3e-66 205-354
Wolf-PSORT
Lj1g3v2095480.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2095480.1