Miyakogusa Predicted Gene

Lj1g3v2071040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KW21_SOYBN 308 42.2 56.2 (tr|I1KW21) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G46240.1 280 40.6 58.9 | Symbols: KAT1 | potassium channel in Arabidopsis thaliana 1 | chr5:18743652-18746561 REVERSE LENGTH=677
Medicago Medtr8g446430.1 302 43.0 58.7 | inwardly rectifying potassium channel subunit | HC | chr8:18172285-18164208 | 20130731
Soybean Glyma08g24960.1 308 42.2 56.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2071040.1 length: 478 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
ProfileScan PS50042 CNMP_BINDING_3 7.848 300-386
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 4.2e-05 11-21
162-179
188-199
IPR013099 Ion transport 2
HMMPfam PF07885 Ion_trans_2 4.3e-08 126-212
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 4.9e-07 270-419
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 8.3e-24 218-431
no_ID  
Gene3D G3DSA:1.10.287.70 no description 7e-21 3-212
HMMPanther PTHR10217 VOLTAGE 4.5e-46 9-415
Seg seg seg NA 9-27
superfamily SSF81324 Voltage-gated 3.2e-25 85-260
Putative transmembrane regions
  From To
TM segments
SOSUI
9 31
61 83
111 133
157 178
192 214
Wolf-PSORT
Lj1g3v2071040.1	cyto 6, cysk 3, cyto_nucl 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2071040.1