Miyakogusa Predicted Gene

Lj1g3v2066520.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KTX6_SOYBN 923 74.9 85.9 (tr|K7KTX6) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT3G63520.1 192 29.2 47.3 | Symbols: CCD1, ATCCD1, ATNCED1, NCED1 | carotenoid cleavage dioxygenase 1 | chr3:23452940-23455896 FORWARD LENGTH=538
Medicago Medtr3g110195.1 896 74.4 83.9 | retinal pigment epithelial membrane protein | HC | chr3:51201204-51196407 | 20130731
Soybean Glyma04g08860.1 394 57.9 68.8  
LJGI gnl|LJGI|TC60597 620 87.5 87.5 similar to UniRef100_A7P585 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2066520.1 length: 578 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 BETA-CAROTENE 3e-125 21-570
HMMPfam PF03055 RPE65 5.3e-113 77-572
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 3e-125 21-570
Seg seg seg NA 83-94
Wolf-PSORT
Lj1g3v2066520.1	pero 7, chlo 3, cyto 2, nucl 1, extr 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2066520.1