Miyakogusa Predicted Gene

Lj1g3v2065490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K9D1_SOYBN 427 57.2 67.1 (tr|I1K9D1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G20030.1 199 37.1 50.3 | Symbols: | RING/U-box superfamily protein | chr2:8647813-8648985 FORWARD LENGTH=390
Medicago Medtr3g110190.1 404 60.1 71.9 | RING-H2 finger protein ATL4J | HC | chr3:51190946-51189912 | 20130731
Soybean Glyma06g08930.1 417 57.7 67.3  
LJGI gnl|LJGI|TC63865 1497 99.9 99.9 weakly similar to UniRef100_A7PEJ8 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2065490.1 length: 383 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.6e-15 121-164
HMMSmart SM00184 Ring 4.4e-07 122-163
ProfileScan PS50089 ZF_RING_2 12.961 122-164
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-19 117-167
no_ID  
Coil coil coiled-coil NA 357-378
HMMPanther PTHR14155 RING 1.2e-41 40-191
Seg seg seg NA 85-95
253-271
superfamily SSF57850 RING/U-box 4.2e-21 95-170
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 22
45 67
Wolf-PSORT
Lj1g3v2065490.1	plas 9, vacu 2, extr 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2065490.1