Miyakogusa Predicted Gene
- Lj1g3v2063210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SC14_LOTJA |
331 |
100.0 |
100.0 |
(tr|I3SC14) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G25760.2 |
318 |
94.9 |
98.1 |
| Symbols: PEX4 | peroxin4 | chr5:8967983-8969173 FORWARD LENGTH=157 |
| Medicago |
Medtr3g110110.1 |
325 |
98.1 |
98.7 |
| ubiquitin-conjugating enzyme | HC | chr3:51027219-51031280 | 20130731 |
| Soybean |
Glyma06g08720.4 |
328 |
98.7 |
98.7 |
|
| LJGI |
gnl|LJGI|TC57654 |
946 |
100.0 |
100.0 |
homologue to UniRef100_A7P5A6 Cluster: Ubiquitin carrier protein; n=1; Vitis vinifera|Rep: Ubiquitin carrier protein - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2063210.1 |
length: 157 aa. |
| IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
| HMMPfam |
PF00179 |
UQ_con |
2.2e-45 |
7-147 |
| ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
36.805 |
6-133 |
| IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
| Gene3D |
G3DSA:3.10.110.10 |
no description |
2.1e-58 |
2-153 |
| superfamily |
SSF54495 |
UBC-like |
4.2e-51 |
1-154 |
| IPR023313 |
Ubiquitin-conjugating enzyme, active site |
| PatternScan |
PS00183 |
UBIQUITIN_CONJUGAT_1 |
NA |
78-94 |
| no_ID |
|
| HMMPanther |
PTHR24067 |
UBIQUITIN-CONJUGATING |
1.8e-97 |
1-155 |
| HMMPanther |
PTHR24067:SF56 |
UBIQUITIN |
1.8e-97 |
1-155 |
| HMMSmart |
SM00212 |
Ubiquitin-conjugating |
1.6e-52 |
6-153 |
- Wolf-PSORT
Lj1g3v2063210.1 nucl 6, mito 4, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2063210.1 |
|