Miyakogusa Predicted Gene

Lj1g3v2035170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5Y1C3_PRUPE 802 68.1 83.3 (tr|M5Y1C3) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017604mg PE=4 SV=1
TAIR_pep AT3G15130.1 662 58.2 73.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:5097153-5099222 REVERSE LENGTH=689
Medicago Medtr8g086560.1 425 40.2 63.5 | PPR containing plant protein | HC | chr8:35911406-35914374 | 20130731
Soybean Glyma04g08350.1 692 81.3 90.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2035170.1 length: 550 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.14 144-170
248-274
276-302
448-472
HMMPfam PF13041 PPR_2 1e-12 69-114
170-217
372-420
HMMTigr TIGR00756 PPR: 1.6e-08 45-71
71-104
144-170
172-206
347-375
375-409
ProfileScan PS51375 PPR 5.086 3-37
38-72
73-103
170-204
139-169
205-239
242-276
373-407
342-372
408-443
444-474
510-544
476-506
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00063 477-532
no_ID  
HMMPanther PTHR24015 FAMILY 4.2e-297 23-550
HMMPanther PTHR24015:SF63 PENTATRICOPEPTIDE 4.2e-297 23-550
Wolf-PSORT
Lj1g3v2035170.1	E.R. 6, cyto 5, nucl 1, mito 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2035170.1