Miyakogusa Predicted Gene

Lj1g3v2035110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T705_LOTJA 341 91.4 91.4 (tr|I3T705) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G20780.1 72.0 57.1 73.0 | Symbols: CML42 | calmodulin like 42 | chr4:11133309-11133884 REVERSE LENGTH=191
Medicago Medtr3g109320.1 228 65.2 74.9 | EF hand calcium-binding family protein | HC | chr3:50557367-50556318 | 20130731
Soybean Glyma04g08300.1 235 67.7 75.3  
LJGI gnl|LJGI|GO011515 898 99.8 99.8 similar to UniRef100_A7Q9U8 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2035110.1 length: 187 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 83 122-150
160-187
ProfileScan PS50222 EF_HAND_2 8.097 42-77
118-153
156-187
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2e-17 45-185
HMMPfam PF13499 EF_hand_5 1.6e-12 123-185
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 131-143
no_ID  
Coil coil coiled-coil NA 106-127
HMMPanther PTHR10891 EF-HAND 3.8e-17 123-185
HMMPanther PTHR10891:SF43 CALCIUM-BINDING 3.8e-17 123-185
Seg seg seg NA 101-115
superfamily SSF47473 EF-hand 3.2e-17 22-185
Wolf-PSORT
Lj1g3v2035110.1	cyto 5, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2035110.1