Miyakogusa Predicted Gene

Lj1g3v2035090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S4X3_LOTJA 757 90.0 90.3 (tr|I3S4X3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G29150.1 659 79.0 85.1 | Symbols: ATS9, RPN6 | non-ATPase subunit 9 | chr1:10181240-10182499 FORWARD LENGTH=419
Medicago Medtr3g109300.1 724 84.8 88.6 | 26S proteasome non-ATPase regulatory subunit-like protein | LC | chr3:50533714-50540516 | 20130731
Soybean Glyma04g08280.1 724 85.8 88.2  
LJGI gnl|LJGI|TC60588 2512 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2035090.1 length: 422 aa.
IPR000717 Proteasome component (PCI) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01399 PCI 2.7e-19 285-386
HMMSmart SM00088 motif 1.2e-18 320-403
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00057 109-260
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 2.1e-23 315-396
IPR013143 PCI/PINT associated module
HMMSmart SM00753 PCI/PINT 4.3e-62 143-319
no_ID  
HMMPanther PTHR10678 26S 1.1e-225 14-422
HMMPanther PTHR10678:SF2 26S 1.1e-225 14-422
Seg seg seg NA 156-176
182-199
superfamily SSF46785 "Winged 1.4e-22 314-397
Wolf-PSORT
Lj1g3v2035090.1	chlo 5, cyto 3, plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2035090.1