Miyakogusa Predicted Gene

Lj1g3v1991490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IPR0_MEDTR 322 58.4 68.9 (tr|G7IPR0) Splicing factor 3B subunit OS=Medicago truncatula GN=MTR_2g013350 PE=4 SV=1
TAIR_pep AT4G21660.1 292 63.7 75.5 | Symbols: | proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=584
Medicago Medtr2g013350.1 322 58.4 68.9 | splicing factor 3B subunit 2 | HC | chr2:3576901-3585046 | 20130731
Soybean Glyma13g25110.1 316 68.3 76.1  
LJGI gnl|LJGI|TC58527 341 92.9 92.9 similar to UniRef100_A7QYP7 Cluster: Chromosome undetermined scaffold_252, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_252, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1991490.1 length: 354 aa.
IPR006568 PSP, proline-rich
method AccNumber shortName E-value location
HMMPfam PF04046 PSP 8e-19 259-304
HMMSmart SM00581 proline-rich 5.1e-14 255-309
IPR007180 Domain of unknown function DUF382
Cellular Component GO:0005634 nucleus    
HMMPfam PF04037 DUF382 1.5e-42 135-249
no_ID  
Coil coil coiled-coil NA 111-132
310-341
HMMPanther PTHR12785 FAMILY 1e-104 11-331
HMMPanther PTHR12785:SF6 SUBFAMILY 1e-104 11-331
Seg seg seg NA 34-47
56-73
292-303
315-336
Wolf-PSORT
Lj1g3v1991490.1	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1991490.1