Miyakogusa Predicted Gene

Lj1g3v1968360.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6TJ45_SOYBN 89.4 76.3 81.4 (tr|C6TJ45) Putative uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep --No_Hits--

Medicago Medtr3g108910.1 73.2 50.6 57.6 | hypothetical protein | HC | chr3:50337688-50335890 | 20130731

Soybean Glyma04g08050.1 89.4 76.3 81.4

LJGI gnl|LJGI|TC68804 396 100.0 100.0 similar to UniRef100_Q945P6 Cluster: At2g24550/F25P17.15; n=1; Arabidopsis thaliana|Rep: At2g24550/F25P17.15 - Arabidopsis thaliana (Mouse-ear cress), partial (24%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v1968360.1 length: 94 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 7-28

Seg seg seg NA 8-24
31-39
84-93

Wolf-PSORT

Lj1g3v1968360.1 nucl 10, mito 2, chlo 1, extr 1, cyto_mito 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1968360.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6TJ45_SOYBN	89.4	76.3	81.4	(tr\|C6TJ45) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	--No_Hits--
Medicago	Medtr3g108910.1	73.2	50.6	57.6	\| hypothetical protein \| HC \| chr3:50337688-50335890 \| 20130731
Soybean	Glyma04g08050.1	89.4	76.3	81.4
LJGI	gnl\|LJGI\|TC68804	396	100.0	100.0	similar to UniRef100_Q945P6 Cluster: At2g24550/F25P17.15; n=1; Arabidopsis thaliana\|Rep: At2g24550/F25P17.15 - Arabidopsis thaliana (Mouse-ear cress), partial (24%)

no_ID
Lj1g3v1968360.1				length: 94 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	7-28
Seg	seg	seg	NA	8-24 31-39 84-93