Miyakogusa Predicted Gene

Lj1g3v1967300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K941_SOYBN 647 64.3 72.0 (tr|I1K941) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G24870.2 301 40.1 53.4 | Symbols: | RING/U-box superfamily protein | chr5:8545008-8546923 REVERSE LENGTH=520
Medicago Medtr3g108808.3 680 66.5 73.0 | zinc finger (C3HC4-type RING finger) family protein | HC | chr3:50292649-50288412 | 20130731
Soybean Glyma06g08030.1 647 64.3 72.0  
LJGI gnl|LJGI|TC62674 2117 100.0 100.0 similar to UniRef100_A7P4X9 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1967300.1 length: 535 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 2.7e-12 480-524
HMMSmart SM00184 Ring 1.6e-06 481-521
ProfileScan PS50089 ZF_RING_2 11.530 481-522
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.7e-14 476-525
no_ID  
Coil coil coiled-coil NA 387-408
HMMPanther PTHR14155 RING 2.4e-73 352-523
HMMPanther PTHR14155:SF25 ZINC 2.4e-73 352-523
Seg seg seg NA 78-91
118-131
226-241
323-346
402-415
527-534
superfamily SSF57850 RING/U-box 7.8e-18 474-528
Wolf-PSORT
Lj1g3v1967300.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1967300.1