Miyakogusa Predicted Gene

Lj1g3v1966230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JCC9_MEDTR 684 92.5 93.9 (tr|G7JCC9) COP9 signalosome complex subunit 5b OS=Medicago truncatula GN=MTR_3g108790 PE=4 SV=1
TAIR_pep AT1G71230.1 584 79.7 87.1 | Symbols: CSN5B, CSN5, AJH2 | COP9-signalosome 5B | chr1:26852560-26854255 FORWARD LENGTH=358
Medicago Medtr3g108790.1 684 92.5 93.9 | COP9 signalosome complex subunit 5 | HC | chr3:50262107-50265078 | 20130731
Soybean Glyma04g07940.1 674 90.1 92.3  
LJGI gnl|LJGI|TC70690 2141 100.0 100.0 similar to UniRef100_Q9FR56 Cluster: JAB; n=1; Solanum lycopersicum|Rep: JAB - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1966230.1 length: 358 aa.
IPR000555 JAB1/Mov34/MPN/PAD-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01398 JAB 4.4e-33 57-168
HMMSmart SM00232 JAB/MPN 4.6e-47 59-196
no_ID  
Gene3D G3DSA:3.40.140.10 no description 4.5e-08 59-191
HMMPanther PTHR10410 EUKARYOTIC 1.6e-215 17-343
HMMPanther PTHR10410:SF6 COP9 1.6e-215 17-343
Seg seg seg NA 4-9
236-246
superfamily SSF102712 JAB1/MPN 1.6e-13 57-203
Wolf-PSORT
Lj1g3v1966230.1	nucl 9.5, cyto_nucl 6, chlo 2, cyto 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1966230.1