Miyakogusa Predicted Gene

Lj1g3v1966200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SHT3_LOTJA 542 96.0 96.0 (tr|I3SHT3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G24490.2 251 46.2 65.6 | Symbols: RPA2, ATRPA2, ROR1, ATRPA32A, RPA32A | replicon protein A2 | chr2:10398651-10400416 REVERSE LENGTH=279
Medicago Medtr1g009890.1 363 66.7 80.2 | replication protein A 32 kDa subunit-like protein | HC | chr1:1581516-1585760 | 20130731
Soybean Glyma14g17270.1 389 68.8 81.2  
LJGI gnl|LJGI|TC61399 1598 99.5 99.5 similar to UniRef100_Q7XZT4 Cluster: RPA 32kDa; n=1; Pisum sativum|Rep: RPA 32kDa - Pisum sativum (Garden pea), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1966200.1 length: 274 aa.
IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01336 tRNA_anti 1.7e-10 74-146
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 2.8e-16 209-274
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.4e-43 40-168
superfamily SSF50249 Nucleic 1.6e-37 42-170
IPR014646 Replication protein A, subunit RPA32
HMMPIR PIRSF036949 Replication 5.4e-75 1-274
IPR014892 Replication protein A, C-terminal
HMMPfam PF08784 RPA_C 2e-15 165-269
no_ID  
HMMPanther PTHR13989 REPLICATION 4.7e-74 1-274
HMMPanther PTHR13989:SF7 SUBFAMILY 4.7e-74 1-274
Seg seg seg NA 21-31
superfamily SSF46785 "Winged 2.2e-13 207-274
Wolf-PSORT
Lj1g3v1966200.1	nucl 9, cyto 3, chlo 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1966200.1