Miyakogusa Predicted Gene
- Lj1g3v1965120.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1965120.2 |
length: 303 aa. |
IPR005101 |
DNA photolyase, FAD-binding/Cryptochrome, C-terminal |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0003913 |
DNA photolyase activity |
|
|
Biological Process |
GO:0006281 |
DNA repair |
|
|
HMMPfam |
PF03441 |
FAD_binding_7 |
2.1e-15 |
154-279 |
superfamily |
SSF48173 |
Cryptochrome/photolyase |
1.1e-35 |
145-279 |
IPR006050 |
DNA photolyase, N-terminal |
HMMPfam |
PF00875 |
DNA_photolyase |
1.3e-12 |
2-117 |
ProfileScan |
PS51645 |
PHR_CRY_ALPHA_BETA |
13.817 |
1-64 |
superfamily |
SSF52425 |
Cryptochrome/photolyase, |
1.2e-16 |
2-156 |
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
Gene3D |
G3DSA:3.40.50.620 |
no description |
4.2e-19 |
2-94 |
no_ID |
|
Gene3D |
G3DSA:1.10.579.10 |
no description |
3.1e-05 |
237-279 |
Gene3D |
G3DSA:1.25.40.80 |
no description |
8.4e-57 |
95-236 |
HMMPanther |
PTHR11455 |
CRYPTOCHROME |
2.3e-69 |
1-277 |
- Wolf-PSORT
Lj1g3v1965120.2 nucl 6, cyto 2, plas 2, cysk 2, cysk_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v1965120.2 |
|