Miyakogusa Predicted Gene

Lj1g3v1943900.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KTN3_SOYBN 909 66.4 72.9 (tr|K7KTN3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G31160.1 587 45.0 55.5 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | chr4:15145936-15152939 FORWARD LENGTH=1883
Medicago Medtr3g108470.1 905 65.8 71.8 | DDB1- and CUL4-associated factor-like protein | HC | chr3:50133071-50123613 | 20130731
Soybean Glyma06g07880.1 767 58.8 64.8  
LJGI gnl|LJGI|FS361548 450 87.3 87.3 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1943900.2 length: 744 aa.
IPR006594 LisH dimerisation motif
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00667 Lissencephaly 6.2e-05 556-588
ProfileScan PS50896 LISH 10.095 556-588
no_ID  
Coil coil coiled-coil NA 43-71
HMMPanther PTHR13129 VPRBP 1.4e-155 1-730
HMMPanther PTHR13129:SF4 SUBFAMILY 1.4e-155 1-730
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-20
Seg seg seg NA 58-82
106-117
404-416
526-554
586-597
651-668
Wolf-PSORT
Lj1g3v1943900.2	chlo 9, nucl 3, plas 1, E.R. 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1943900.2