Miyakogusa Predicted Gene
- Lj1g3v1943880.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JZE2_SOYBN |
142 |
83.1 |
92.2 |
(tr|I1JZE2) Methylenetetrahydrofolate reductase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT2G44160.1 |
125 |
70.1 |
89.6 |
| Symbols: MTHFR2 | methylenetetrahydrofolate reductase 2 | chr2:18262301-18265185 FORWARD LENGTH=594 |
| Medicago |
Medtr1g040105.1 |
140 |
81.8 |
90.9 |
| methylenetetrahydrofolate reductase | HC | chr1:14723769-14718084 | 20130731 |
| Soybean |
Glyma04g43540.3 |
142 |
83.1 |
92.2 |
|
| LJGI |
gnl|LJGI|TC74190 |
210 |
86.5 |
86.5 |
similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate reductase; n=1; Vitis vinifera|Rep: Methylenetetrahydrofolate reductase - Vitis vinifera (Grape), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1943880.1 |
length: 83 aa. |
| IPR003171 |
Methylenetetrahydrofolate reductase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004489 |
methylenetetrahydrofolate reductase (NADPH) activity |
|
|
| Biological Process |
GO:0006555 |
methionine metabolic process |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF02219 |
MTHFR |
1e-22 |
1-78 |
| no_ID |
|
| Gene3D |
G3DSA:3.20.20.220 |
no description |
3.9e-22 |
1-79 |
| HMMPanther |
PTHR21091 |
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE |
7.7e-24 |
1-77 |
| HMMPanther |
PTHR21091:SF1 |
METHYLENETETRAHYDROFOLATE |
7.7e-24 |
1-77 |
| superfamily |
SSF51730 |
FAD-linked |
1.5e-13 |
1-82 |
- Wolf-PSORT
Lj1g3v1943880.1 cyto 9, cysk 2, chlo 1, mito 1, golg 1, chlo_mito 1, cysk_nucl 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1943880.1 |
Not targeted |
-28.980 |
0 |
-2.364 |
28.38% |
-26.616
|