Miyakogusa Predicted Gene
- Lj1g3v1932810.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K757_MEDTR |
106 |
76.2 |
87.3 |
(tr|G7K757) FAR1-related protein OS=Medicago truncatula GN=MTR_5g072190 PE=4 SV=1 |
| TAIR_pep |
AT1G10240.1 |
65.5 |
40.5 |
59.5 |
| Symbols: FRS11 | FAR1-related sequence 11 | chr1:3356835-3359271 REVERSE LENGTH=680 |
| Medicago |
Medtr3g450850.1 |
96.3 |
68.9 |
86.9 |
| FAR1 DNA-binding domain protein | LC | chr3:17615614-17616669 | 20130731 |
| Soybean |
Glyma17g21790.1 |
75.5 |
34.6 |
52.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1932810.1 |
length: 198 aa. |
| IPR004330 |
FAR1 DNA binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03101 |
FAR1 |
2e-08 |
67-117 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
13 |
35 |
| 48 |
70 |
| 129 |
151 |
| 165 |
187 |
- Wolf-PSORT
Lj1g3v1932810.1 plas 7.5, golg_plas 6.5, golg 4.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1932810.1 |
|