Miyakogusa Predicted Gene

Lj1g3v1932550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBW7_SOYBN 961 83.3 90.5 (tr|I1NBW7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G14520.1 710 61.8 76.3 | Symbols: | pescadillo-related | chr5:4680789-4684330 REVERSE LENGTH=590
Medicago Medtr7g100040.1 944 78.6 87.6 | pescadillo-like protein | HC | chr7:40201169-40205369 | 20130731
Soybean Glyma19g42070.1 961 83.3 90.5  
LJGI gnl|LJGI|TC58980 1501 98.9 98.9 similar to UniRef100_A7PM40 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1932550.1 length: 587 aa.
IPR001357 BRCT domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.10190 no description 6.3e-17 337-427
HMMPfam PF00533 BRCT 3.1e-08 345-419
HMMSmart SM00292 breast 8e-06 344-422
ProfileScan PS50172 BRCT 13.757 342-432
superfamily SSF52113 BRCT 2.4e-17 342-436
IPR010613 Pescadillo
Cellular Component GO:0005730 nucleolus    
Biological Process GO:0042254 ribosome biogenesis    
HMMPfam PF06732 Pescadillo_N 1.3e-97 10-273
no_ID  
Coil coil coiled-coil NA 75-105
HMMPanther PTHR12221 PESCADILLO 1.4e-222 4-587
HMMPanther PTHR12221:SF6 SUBFAMILY 1.4e-222 4-587
Seg seg seg NA 562-575
Wolf-PSORT
Lj1g3v1932550.1	chlo 8, mito 4, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1932550.1